File Size Description MD5sum
odb12v1_species.tab.gz 0.6 MB Ortho DB organism ids based on NCBI taxonomy ids (mostly species level) e94799c40ef57ec69c22cb8d0e8b02af
odb12v1_levels.tab.gz 15.6 kB NCBI taxonomy levels (clades) where orthologous groups (OGs) are calculated 1030440338841fdeaef055e2b8ac1b8e
odb12v1_level2species.tab.gz 239.8 kB correspondence between level ids and organism ids 735aa6434704516a0d59a42930f651ea
odb12v1_genes.tab.gz 4.5 GB Ortho DB genes with some info e2c7d97e149ce848a19546595b80ef68
odb12v1_gene_xrefs.tab.gz 4.4 GB xrefs associated with Ortho DB gene b9223ecc98780a83fd531a007eb87c0c
odb12v1_OGs.tab.gz 138.5 MB Ortho DB orthologous groups c8418164081471b3ab3452767acbbadb
odb12v1_OG2genes.tab.gz 4.6 GB OGs to genes correspondence c72741ad5e812458ac1602254b04c0c5
odb12v1_OG_pairs.tab.gz 74.7 MB OG hierarchy coded as descendant-antecedent pairs 44bea3fa9eab931521f1e406fa87b98a
odb12v1_OG_xrefs.tab.gz 333.1 MB OG associations with GO, COG and InterPro ids 40791f64ba2f56ae3d2282913a51d6dc
odb12v1_aa_fasta.gz 36.3 GB Fasta-formatted AA sequences, all organisms, all genes 3d4bb161e0d2a7a5415a5dbb9c2122ec
odb12v1_og_aa_fasta.gz 35.0 GB Fasta-formatted AA sequences, all organisms, all genes present in OGs c34f2f6ce7dbe9dd192c27b7296cfab1
odb12v1_cds_fasta.gz 53.6 GB Fasta-formatted CDS sequences, all organisms, all genes 6b863e6e49a75c71da7baec7d710a47d
odb12v1_dna_fasta.tgz 751.8 GB Fasta-formatted genomic source DNA sequences, all organisms, all genes 3911d80d5388322625b6a2e418b809d6
README.txt 3.4 kB Main readme file c22a170da4160fa77f2237839e1d6968