File |
Size |
Description |
MD5sum |
odb12v0_species.tab.gz |
0.6 MB |
Ortho DB organism ids based on NCBI taxonomy ids (mostly species level) |
3c8f7468a2ef7fa71dc33449454df384 |
odb12v0_levels.tab.gz |
15.6 kB |
NCBI taxonomy levels (clades) where orthologous groups (OGs) are calculated |
cb37b9eb7fa1d8ad6fb3ce3113064b06 |
odb12v0_level2species.tab.gz |
237.6 kB |
correspondence between level ids and organism ids |
6a4b8fa429411eaa8b45f48c6cf38b90 |
odb12v0_genes.tab.gz |
4.5 GB |
Ortho DB genes with some info |
523cac5ee3c2c5e81dac559ac104afb8 |
odb12v0_gene_xrefs.tab.gz |
4.4 GB |
xrefs associated with Ortho DB gene |
9a8e049df689aa7614f007b795f8cd01 |
odb12v0_OGs.tab.gz |
128.7 MB |
Ortho DB orthologous groups |
c495a284e25ff736240cb2c306a204b2 |
odb12v0_OG2genes.tab.gz |
3.9 GB |
OGs to genes correspondence |
ae04d8a9da50d0dd2bb6cbd6cabd8335 |
odb12v0_OG_pairs.tab.gz |
73.7 MB |
OG hierarchy coded as descendant-antecedent pairs |
ca7be9acf34551fd56cad7e233e23cb6 |
odb12v0_OG_xrefs.tab.gz |
333.6 MB |
OG associations with GO, COG and InterPro ids |
d39ffc48fe52202fac6cc71bb30a5811 |
odb12v0_aa_fasta.gz |
36.3 GB |
Fasta-formatted AA sequences, all organisms, all genes |
351a6ee7e6f1489b9f0b2c739f007ced |
odb12v0_og_aa_fasta.gz |
35.0 GB |
Fasta-formatted AA sequences, all organisms, all genes present in OGs |
510815b25d8b08ba028099046e5b5cc6 |
odb12v0_cds_fasta.gz |
53.6 GB |
Fasta-formatted CDS sequences, all organisms, all genes |
35facc954dfb7127ed1c4f6c8b17c8e8 |
odb12v0_dna_fasta.tgz |
751.8 GB |
Fasta-formatted genomic source DNA sequences, all organisms, all genes |
3911d80d5388322625b6a2e418b809d6 |
README.txt |
3.4 kB |
Main readme file |
7d837133d235fa1fe5ff2192fef44f2c |