File |
Size |
Description |
MD5sum |
odb12v1_species.tab.gz |
0.6 MB |
Ortho DB organism ids based on NCBI taxonomy ids (mostly species level) |
e94799c40ef57ec69c22cb8d0e8b02af |
odb12v1_levels.tab.gz |
15.6 kB |
NCBI taxonomy levels (clades) where orthologous groups (OGs) are calculated |
1030440338841fdeaef055e2b8ac1b8e |
odb12v1_level2species.tab.gz |
239.8 kB |
correspondence between level ids and organism ids |
735aa6434704516a0d59a42930f651ea |
odb12v1_genes.tab.gz |
4.5 GB |
Ortho DB genes with some info |
e2c7d97e149ce848a19546595b80ef68 |
odb12v1_gene_xrefs.tab.gz |
4.4 GB |
xrefs associated with Ortho DB gene |
b9223ecc98780a83fd531a007eb87c0c |
odb12v1_OGs.tab.gz |
138.5 MB |
Ortho DB orthologous groups |
c8418164081471b3ab3452767acbbadb |
odb12v1_OG2genes.tab.gz |
4.6 GB |
OGs to genes correspondence |
c72741ad5e812458ac1602254b04c0c5 |
odb12v1_OG_pairs.tab.gz |
74.7 MB |
OG hierarchy coded as descendant-antecedent pairs |
44bea3fa9eab931521f1e406fa87b98a |
odb12v1_OG_xrefs.tab.gz |
333.1 MB |
OG associations with GO, COG and InterPro ids |
40791f64ba2f56ae3d2282913a51d6dc |
odb12v1_aa_fasta.gz |
36.3 GB |
Fasta-formatted AA sequences, all organisms, all genes |
3d4bb161e0d2a7a5415a5dbb9c2122ec |
odb12v1_og_aa_fasta.gz |
35.0 GB |
Fasta-formatted AA sequences, all organisms, all genes present in OGs |
c34f2f6ce7dbe9dd192c27b7296cfab1 |
odb12v1_cds_fasta.gz |
53.6 GB |
Fasta-formatted CDS sequences, all organisms, all genes |
6b863e6e49a75c71da7baec7d710a47d |
odb12v1_dna_fasta.tgz |
751.8 GB |
Fasta-formatted genomic source DNA sequences, all organisms, all genes |
3911d80d5388322625b6a2e418b809d6 |
README.txt |
3.4 kB |
Main readme file |
c22a170da4160fa77f2237839e1d6968 |